I2S Masters/ Doctoral Theses


All students and faculty are welcome to attend the final defense of I2S graduate students completing their M.S. or Ph.D. degrees. Defense notices for M.S./Ph.D. presentations for this year and several previous years are listed below in reverse chronological order.

Students who are nearing the completion of their M.S./Ph.D. research should schedule their final defenses through the EECS graduate office at least THREE WEEKS PRIOR to their presentation date so that there is time to complete the degree requirements check, and post the presentation announcement online.

Upcoming Defense Notices

Shailesh Pandey

Vision-Based Motor Assessment in Autism: Deep Learning Methods for Detection, Classification, and Tracking

When & Where:


Zoom Meeting: https://kansas.zoom.us/j/87952337768 Meeting ID: 879 5233 7768 Passcode: 965792

Degree Type:

PhD Comprehensive Defense

Committee Members:

Sumaiya Shomaji, Chair
Shima Fardad
Zijun Yao
Cuncong Zhong
Lisa Dieker

Abstract

Motor difficulties show up in as many as 90% of people with autism, but surprisingly few, somewhere between 13% and 32%, ever get motor-focused help. A big part of the problem is that the tools we have for measuring motor skills either rely on a clinician's subjective judgment or require expensive lab equipment that most families will never have access to. This dissertation tries to close that gap with three projects, all built around the idea that a regular webcam and some well-designed deep learning models can do much of what costly motion-capture labs do today.

The first project asks a straightforward question: can a computer tell the difference between how someone with autism moves and how a typically developing person moves, just by watching a short video? The answer, it turns out, is yes. We built an ensemble of three neural networks, each one tuned to notice something different. One focuses on how joints coordinate with each other spatially, other zeroes in on the timing of movements, and the third learns which body-part relationships matter most for a given clip. We tested the system on 582 videos from 118 people (69 with ASD and 49 without) performing simple everyday actions like stirring or hammering. The ensemble correctly classifies 95.65% of cases. The timing-focused model on its own hits 92%, which is nearly 10 points better than a standard recurrent network baseline. And when all three models agree, accuracy climbs above 98%.

The second project deals with stimming, the repetitive behaviors like arm flapping, head banging, and spinning that are common in autism. Working with 302 publicly available videos, we trained a skeleton-based model that reaches 91% accuracy using body pose alone. That is more than double the 47% that previous work managed on the same benchmark. When we combine the pose information with what the raw video shows through a late fusion approach, accuracy jumps to 99.9%. Across the entire test set, only a single video was misclassified.

The third project is E-MotionSpec, a web platform designed for clinicians and researchers who want to track motor development over time. It runs in any browser, uses MediaPipe to estimate body pose in real time, and extracts 44 movement features grouped into seven domains covering things like how smoothly someone moves, how quickly they initiate actions, and how coordinated their limbs are. We validated the platform on the same 118-participant dataset and found 36 features with statistically significant differences between the ASD and typically developing groups. Smoothness and initiation timing stood out as the strongest discriminators. The platform also includes tools for comparing sessions over time using frequency analysis and dynamic time warping, so a clinician can actually see whether someone's motor patterns are changing across weeks or months.

Taken together, these three projects offer a practical path toward earlier identification and better ongoing monitoring of motor difficulties in autism. Everything runs on a webcam and a web browser. No motion-capture suits, no force plates, no specialized labs. That matters most for the families, schools, and clinics that need these tools the most and can least afford the alternatives.


Past Defense Notices

Dates

QiTao Weng

Anytime Computer Vision for Autonomous Driving

When & Where:


Eaton Hall, Room 2001B

Degree Type:

MS Thesis Defense

Committee Members:

Heechul Yun, Chair
Drew Davidson
Shawn Keshmiri


Abstract

Latency–accuracy tradeoffs are fundamental in real-time applications of deep neural networks (DNNs) for cyber-physical systems. In autonomous driving, in particular, safety depends on both prediction quality and the end-to-end delay from sensing to actuation. We observe that (1) when latency is accounted for, the latency-optimal network configuration varies with scene context and compute availability; and (2) a single fixed-resolution model becomes suboptimal as conditions change.

We present a multi-resolution, end-to-end deep neural network for the CARLA urban driving challenge using monocular camera input. Our approach employs a convolutional neural network (CNN) that supports multiple input resolutions through per-resolution batch normalization, enabling runtime selection of an ideal input scale under a latency budget, as well as resolution retargeting, which allows multi-resolution training without access to the original training dataset.

We implement and evaluate our multi-resolution end-to-end CNN in CARLA to explore the latency–safety frontier. Results show consistent improvements in per-route safety metrics—lane invasions, red-light infractions, and collisions—relative to fixed-resolution baselines.


Sherwan Jalal Abdullah

A Versatile and Programmable UAV Platform for Integrated Terrestrial and Non-Terrestrial Network Measurements in Rural Areas

When & Where:


Eaton Hall, Room 2001B

Degree Type:

MS Thesis Defense

Committee Members:

Morteza Hashemi, Chair
Victor Frost
Shawn Keshmiri


Abstract

Reliable cellular connectivity is essential for modern services such as telehealth, precision agriculture, and remote education; yet, measuring network performance in rural areas presents significant challenges. Traditional drive testing cannot access large geographic areas between roads, while crowdsourced data provides insufficient spatial resolution in low-population regions. To address these limitations, we develop an open-source UAV-based measurement platform that integrates an onboard computation unit, commercial cellular modem, and automated flight control to systematically capture Radio Access Network (RAN) signals and end-to-end network performance metrics at different altitudes. Our platform collects synchronized measurements of signal strength (RSRP, RSSI), signal quality (RSRQ, SINR), latency, and bidirectional throughput, with each measurement tagged with GPS coordinates and altitude. Experimental results from a semi-rural deployment reveal a fundamental altitude-dependent trade-off: received signal power improves at higher altitudes due to enhanced line-of-sight conditions, while signal quality degrades from increased interference with neighboring cells. Our analysis indicates that most of the measurement area maintains acceptable signal quality, along with adequate throughput performance, for both uplink and downlink communications. We further demonstrate that strong radio signal metrics for individual cells do not necessarily translate to spatial coverage dominance such that the cell serving the majority of our test area exhibited only moderate performance, while cells with superior metrics contributed minimally to overall coverage. Next, we develop several machine learning (ML) models to improve the prediction accuracy of signal strength at unmeasured altitudes. Finally, we extend our measurement platform by integrating non-terrestrial network (NTN) user terminals with the UAV components to investigate the performance of Low-earth Orbit (LEO) satellite networks with UAV mobility. Our measurement results demonstrate that NTN offers a viable fallback option by achieving acceptable latency and throughput performance during flight operations. Overall, this work establishes a reproducible methodology for three-dimensional rural network characterization and provides practical insights for network operators, regulators, and researchers addressing connectivity challenges in underserved areas.


Satya Ashok Dowluri

Comparison of Copy-and-Patch and Meta-Tracing Compilation techniques in the context of Python

When & Where:


Eaton Hall, Room 2001B

Degree Type:

MS Thesis Defense

Committee Members:

Prasad Kulkarni, Chair
David Johnson
Hossein Saiedian


Abstract

Python's dynamic nature makes performance enhancement challenging. Recently, a JIT compiler using a novel copy-and-patch compilation approach was implemented in the reference Python implementation, CPython. Our goal in this work is to study and understand the performance properties of CPython's new JIT compiler. To facilitate this study, we compare the quality and performance of the code generated by this new JIT compiler with a more mature and traditional meta-tracing based JIT compiler implemented in PyPy (another Python implementation). Our thorough experimental evaluation reveals that, while it achieves the goal of fast compilation speed, CPython's JIT severely lags in code quality/performance compared with PyPy. While this observation is a known and intentional property of the copy-and-patch approach, it results in the new JIT compiler failing to elevate Python code performance beyond that achieved by the default interpreter, despite significant added code complexity. In this thesis, we report and explain our novel experiments, results, and observations.


Arya Hadizadeh Moghaddam

Learning Personalized and Robust Patient Representations across Graphical and Temporal Structures in Electronic Health Records

When & Where:


Eaton Hall, Room 2001B

Degree Type:

PhD Comprehensive Defense

Committee Members:

Zijun Yao, Chair
Bo Luo
Fengjun Li
Dongjie Wang
Xinmai Yang

Abstract

Recent research in Electronic Health Records (EHRs) has enabled personalized and longitudinal modeling of patient trajectories for health outcome improvement. Despite this progress, existing methods often struggle to capture the dynamic, heterogeneous, and interdependent nature of medical data. Specifically, many representation methods learn a rich set of EHR features in an independent way but overlook the intricate relationships among them. Moreover, data scarcity and bias, such as the cold-start scenarios where patients only have a few visits or rare conditions, remain fundamental challenges in clinical decision support in real-life. To address these challenges, this dissertation aims to introduce an integrated machine learning framework for sophisticated, interpretable, and adaptive EHR representation modeling. Specifically, the dissertation comprises three thrusts:

  1. A time-aware graph transformer model that dynamically constructs personalized temporal graph representations that capture patient trajectory over different visits.
  2. A contrasted multi-Intent recommender system that can disentangle the multiple temporal patterns that coexist in a patient’s long medical history, while considering distinct health profiles.
  3. A few-shot meta-learning framework that can address the patient cold-start issue through a self- and peer-adaptive model enhanced by uncertainty-based filtering.

Together, these contributions advance a data-efficient, generalizable, and interpretable foundation for large-scale clinical EHR mining toward truly personalized medical outcome prediction.


Junyi Zhao

On the Security of Speech-based Machine Translation Systems: Vulnerabilities and Attacks

When & Where:


Eaton Hall, Room 2001B

Degree Type:

MS Thesis Defense

Committee Members:

Bo Luo, Chair
Fengjun Li
Zijun Yao


Abstract

In the light of rapid advancement of global connectivity and the increasing reliance on multilingual communication, speech-based Machine Translation (MT) systems have emerged as essential technologies for facilitating seamless cross-lingual interaction. These systems enable individuals and organizations to overcome linguistic boundaries by automatically translating spoken language in real time. However, despite their growing ubiquity in various applications such as virtual assistants, international conferencing, and accessibility services, the security and robustness of speech-based MT systems remain underexplored. In particular, limited attention has been given to understanding their vulnerabilities under adversarial conditions, where malicious actors intentionally craft or manipulate speech inputs to mislead or degrade translation performance.

This thesis presents a comprehensive investigation into the security landscape of speech-based machine translation systems from an adversarial perspective. We systematically categorize and analyze potential attack vectors, evaluate their success rates across diverse system architectures and environmental settings, and explore the practical implications of such attacks. Furthermore, through a series of controlled experiments and human-subject evaluations, we demonstrate that adversarial manipulations can significantly distort translation outputs in realistic use cases, thereby posing tangible risks to communication reliability and user trust.

Our findings reveal critical weaknesses in current MT models and underscore the urgent need for developing more resilient defense strategies. We also discuss open research challenges and propose directions for building secure, trustworthy, and ethically responsible speech translation technologies. Ultimately, this work contributes to a deeper understanding of adversarial robustness in multimodal language systems and provides a foundation for advancing the security of next-generation machine translation frameworks.


Kyrian C. Adimora

Machine Learning-Based Multi-Objective Optimization for HPC Workload Scheduling: A GNN-RL Approach

When & Where:


Nichols Hall, Room 246 (Executive Conference Room)

Degree Type:

PhD Comprehensive Defense

Committee Members:

Hongyang Sun, Chair
David Johnson
Prasad Kulkarni
Zijun Yao
Michael J. Murray

Abstract

As high-performance computing (HPC) systems achieve exascale capabilities, traditional single-objective schedulers that optimize solely for performance prove inadequate for environments requiring simultaneous optimization of energy efficiency and system resilience. Current scheduling approaches result in suboptimal resource utilization, excessive energy consumption, and reduced fault tolerance in the demanding requirements of large-scale scientific applications. This dissertation proposes a novel multi-objective optimization framework that integrates graph neural networks (GNNs) with reinforcement learning (RL) to jointly optimize performance, energy efficiency, and system resilience in HPC workload scheduling. The central hypothesis posits that graph-structured representations of workloads and system states, combined with adaptive learning policies, can significantly outperform traditional scheduling methods in complex, dynamic HPC environments. The proposed framework comprises three integrated components: (1) GNN-RL, which combines graph neural networks with reinforcement learning for adaptive policy development; (2) EA-GATSched, an energy-aware scheduler leveraging Graph Attention Networks; and (3) HARMONIC (Holistic Adaptive Resource Management for Optimized Next-generation Interconnected Computing), a probabilistic model for workload uncertainty quantification. The proposed methodology encompasses novel uncertainty modeling techniques, scalable GNN-based scheduling algorithms, and comprehensive empirical evaluation using production supercomputing workload traces. Preliminary results demonstrate 10-19% improvements in energy efficiency while maintaining comparable performance metrics. The framework will be evaluated across makespan reduction, energy consumption, resource utilization efficiency, and fault tolerance in various operational scenarios. This research advances sustainable and resilient HPC resource management, providing critical infrastructure support for next-generation scientific computing applications.


Sarah Johnson

Ordering Attestation Protocols

When & Where:


Nichols Hall, Room 246 (Executive Conference Room)

Degree Type:

PhD Comprehensive Defense

Committee Members:

Perry Alexander, Chair
Michael Branicky
Sankha Guria
Emily Witt
Eileen Nutting

Abstract

Remote attestation is a process of obtaining verifiable evidence from a remote party to establish trust. A relying party makes a request of a remote target that responds by executing an attestation protocol producing evidence reflecting the target's system state and meta-evidence reflecting the evidence’s integrity and provenance. This process occurs in the presence of adversaries intent on misleading the relying party to trust a target they should not. This research introduces a robust approach for evaluating and comparing attestation protocols based on their relative resilience against such adversaries. I develop a Rocq-based, formally-verified mathematical model aimed at describing the difficulty for an active adversary to successfully compromise the attestation. The model supports systematically ranking attestation protocols by the level of adversary effort required to produce evidence that does not accurately reflect the target’s state. My work aims to facilitate the selection of a protocol resilient to adversarial attack.


Lohithya Ghanta

Used Car Analytics

When & Where:


Eaton Hall, Room 2001B

Degree Type:

MS Project Defense

Committee Members:

David Johnson, Chair
Morteza Hashemi
Prasad Kulkarni


Abstract

The used car market is characterized by significant pricing variability, making it challenging for buyers and sellers to determine fair vehicle values. To address this, the project applies a machine learning–driven approach to predict used car prices based on real market data extracted from Cars.com. Following extensive data cleaning, feature engineering, and exploratory analysis, several predictive models were developed and evaluated. Among these, the Stacking Regressor demonstrated superior performance, effectively capturing non-linear pricing patterns and achieving the highest accuracy with the lowest prediction error. Key insights indicate that vehicle age and mileage are the primary drivers of price depreciation, while brand and vehicle category exert notable secondary influence. The resulting pricing model provides a data-backed, transparent framework that supports more informed decision-making and promotes fairness and consistency within the used car marketplace.


Rajmal Shaik

A Human-Guided Approach to Context-Aware SQL Generation in Multi-Agent Frameworks

When & Where:


Eaton Hall, Room 2001B

Degree Type:

MS Project Defense

Committee Members:

Dongjie Wang, Chair
Rachel Jarvis
David Johnson


Abstract

Querying information from relational databases often requires proficiency in SQL, creating a steep learning curve for users who lack programming or database management experience. Text-to-SQL systems aim to bridge this gap by automatically converting natural language questions into executable SQL statements. In recent years, multi-agent frameworks have gained traction for this task, as they enable complex query generation to be decomposed into specialized subtasks such as schema selection based on user intent, SQL synthesis, and refinement of SQL queries through execution-based error correction. This work explores the integration of a human feedback component within a multi-agent Text-to-SQL framework. Human input is introduced after the selector agent identifies relevant schemas and tables, offering targeted guidance before SQL generation. The objective is to examine how such feedback can improve the system’s accuracy and contextual understanding of queries. The implementation leverages OpenAI’s GPT-4.1 mini and GPT-4.1 nano models as the underlying language components. The evaluation is carried out using a standard Text-to-SQL benchmark dataset, focusing on key performance metrics such as execution accuracy and validity efficiency scores.


Ashish Adhikari

Towards assessing the security of program binaries

When & Where:


Eaton Hall, Room 2001B

Degree Type:

PhD Comprehensive Defense

Committee Members:

Prasad Kulkarni, Chair
Alex Bardas
Fengjun Li
Bo Luo

Abstract

Software vulnerabilities are widespread, often resulting from coding weaknesses and poor development practices. These vulnerabilities can be exploited by attackers, posing risks to confidentiality, integrity, and availability. To protect themselves, end-users of software may have an interest in knowing whether the software they purchase, and use is secure from potential attacks. Our work is motivated by this need to automatically assess and rate the security properties of binary software.

While many researchers focus on developing techniques and tools to detect and mitigate vulnerabilities in binaries, our approach is different. We aim to determine whether the software has been developed with proper care. Our hypothesis is that software created with meticulous attention to security is less likely to contain exploitable vulnerabilities. As a first step, we examined the current landscape of binary-level vulnerability detection. We categorized critical coding weaknesses in compiled programming languages and conducted a detailed survey comparing static analysis techniques and tools designed to detect these weaknesses. Additionally, we evaluated the effectiveness of open-source CWE detection tools and analyzed their challenges. To further understand their efficacy, we conducted independent assessments using standard benchmarks.

To determine whether software is carefully and securely developed, we propose several techniques. So far, we have used machine learning and deep learning methods to identify the programming language of a binary at the functional level, enabling us to handle complex cases like mixed-language binaries and we assess whether vulnerable regions in the binary are protected with appropriate security mechanisms. Additionally, we explored the feasibility of detecting secure coding practices by examining adherence to SonarQube’s security-related coding conventions.

Next, we investigate whether compiler warnings generated during binary creation are properly addressed. Furthermore, we also aim to optimize the array bounds detection in the program binary. This enhanced array bounds detection will also increase the effectiveness of detecting secure coding conventions that are related to memory safety and buffer overflow vulnerabilities.

Our ultimate goal is to combine these techniques to rate the overall security quality of a given binary software.